Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Sybu-209ENSMUST00000228639 4113 ntBASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh20Q8BIZ0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Gm29707-201ENSMUST00000196325 491 ntBASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Gm44450-201ENSMUST00000199528 114 ntBASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh20Q8BIZ0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Pcdh20Q8BIZ0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh20Q8BIZ0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdh20Q8BIZ0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Gm10819-201ENSMUST00000099988 561 ntBASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Pcdh20Q8BIZ0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms