Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Gm44430-201ENSMUST00000203376 995 ntBASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.53■□□□□ 0.24
Ccdc40Q8BI79 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Gm25016-201ENSMUST00000158399 131 ntBASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.52■□□□□ 0.24
Ccdc40Q8BI79 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc40Q8BI79 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc40Q8BI79 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc40Q8BI79 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc40Q8BI79 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc40Q8BI79 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc40Q8BI79 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc40Q8BI79 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Gm6623-201ENSMUST00000173570 544 ntBASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc40Q8BI79 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms