Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn3bQ8BHK2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Gm15378-201ENSMUST00000121894 207 ntBASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn3bQ8BHK2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Gm10602-201ENSMUST00000098239 609 ntBASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn3bQ8BHK2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn3bQ8BHK2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms