Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nod1Q8BHB0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nod1Q8BHB0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nod1Q8BHB0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nod1Q8BHB0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nod1Q8BHB0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nod1Q8BHB0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Gm17271-201ENSMUST00000165535 355 ntBASIC16.6■□□□□ 0.25
Nod1Q8BHB0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nod1Q8BHB0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Gm7787-201ENSMUST00000216858 688 ntBASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.59■□□□□ 0.25
Nod1Q8BHB0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Nod1Q8BHB0 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nod1Q8BHB0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Gm4899-201ENSMUST00000178708 719 ntBASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nod1Q8BHB0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms