Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Gm15467-201ENSMUST00000120582 445 ntBASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
U2af1l4Q8BGJ9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Gm13312-201ENSMUST00000119631 718 ntBASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1l4Q8BGJ9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Gm23935-201ENSMUST00000102303 57 ntBASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Gm24270-201ENSMUST00000102326 57 ntBASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Gm24245-201ENSMUST00000157318 57 ntBASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Mir5126-201ENSMUST00000175513 77 ntBASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Gm27867-201ENSMUST00000184778 125 ntBASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1l4Q8BGJ9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.59■□□□□ 0.57
U2af1l4Q8BGJ9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms