Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnp1Q80ZI1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trnp1Q80ZI1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnp1Q80ZI1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Gm11424-201ENSMUST00000121929 829 ntBASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Gm5866-201ENSMUST00000177881 973 ntBASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trnp1Q80ZI1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Gm5779-201ENSMUST00000218467 910 ntBASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnp1Q80ZI1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Gm15693-201ENSMUST00000120470 637 ntBASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnp1Q80ZI1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms