Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vrk1Q80X41 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vrk1Q80X41 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Gm24513-201ENSMUST00000174964 138 ntBASIC15.08■□□□□ 0
Vrk1Q80X41 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.08■□□□□ 0
Vrk1Q80X41 Gm27646-201ENSMUST00000183989 110 ntBASIC15.08■□□□□ 0
Vrk1Q80X41 Gm27397-201ENSMUST00000184997 107 ntBASIC15.08■□□□□ 0
Vrk1Q80X41 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.08■□□□□ 0
Vrk1Q80X41 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vrk1Q80X41 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.08■□□□□ 0
Vrk1Q80X41 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk1Q80X41 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Vrk1Q80X41 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.07■□□□□ 0
Vrk1Q80X41 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vrk1Q80X41 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.07■□□□□ 0
Vrk1Q80X41 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Vrk1Q80X41 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.07■□□□□ 0
Vrk1Q80X41 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.07■□□□□ 0
Vrk1Q80X41 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.07■□□□□ 0
Vrk1Q80X41 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Vrk1Q80X41 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.07■□□□□ 0
Vrk1Q80X41 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vrk1Q80X41 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.06■□□□□ 0
Vrk1Q80X41 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.06■□□□□ 0
Vrk1Q80X41 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Gm13216-201ENSMUST00000117145 591 ntBASIC15.06■□□□□ 0
Vrk1Q80X41 Gm4995-201ENSMUST00000117247 432 ntBASIC15.06■□□□□ 0
Vrk1Q80X41 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vrk1Q80X41 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.06■□□□□ 0
Vrk1Q80X41 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.06■□□□□ 0
Vrk1Q80X41 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.06■□□□□ 0
Vrk1Q80X41 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.06■□□□□ 0
Vrk1Q80X41 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vrk1Q80X41 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk1Q80X41 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.06■□□□□ 0
Vrk1Q80X41 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk1Q80X41 Dancr-204ENSMUST00000132389 2347 ntBASIC15.05■□□□□ 0
Vrk1Q80X41 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk1Q80X41 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vrk1Q80X41 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vrk1Q80X41 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vrk1Q80X41 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk1Q80X41 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk1Q80X41 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk1Q80X41 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vrk1Q80X41 Gm23935-201ENSMUST00000102303 57 ntBASIC15.05■□□□□ -0
Vrk1Q80X41 Gm24270-201ENSMUST00000102326 57 ntBASIC15.05■□□□□ -0
Vrk1Q80X41 Gm11764-201ENSMUST00000120221 623 ntBASIC15.05■□□□□ -0
Vrk1Q80X41 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.05■□□□□ -0
Vrk1Q80X41 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vrk1Q80X41 Gm24245-201ENSMUST00000157318 57 ntBASIC15.05■□□□□ -0
Vrk1Q80X41 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.05■□□□□ -0
Vrk1Q80X41 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.05■□□□□ -0
Vrk1Q80X41 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.05■□□□□ -0
Vrk1Q80X41 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms