Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf40bQ80W14 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf40bQ80W14 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Prpf40bQ80W14 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Prpf40bQ80W14 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Gm11780-201ENSMUST00000136880 516 ntBASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf40bQ80W14 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Gm14701-201ENSMUST00000117156 348 ntBASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms