Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Gm2272-201ENSMUST00000194903 582 ntBASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpap1Q80TE0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Gm7336-201ENSMUST00000107041 1232 ntBASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Gm5745-201ENSMUST00000183748 313 ntBASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Rpap1Q80TE0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Gm11453-201ENSMUST00000117318 1007 ntBASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Gm13410-201ENSMUST00000117058 1415 ntBASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpap1Q80TE0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Gm43438-201ENSMUST00000198133 379 ntBASIC24.34■■□□□ 1.49
Rpap1Q80TE0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC24.34■■□□□ 1.49
Rpap1Q80TE0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Gm18057-201ENSMUST00000208220 503 ntBASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpap1Q80TE0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rpap1Q80TE0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC24.32■■□□□ 1.48
Rpap1Q80TE0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms