Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Gm29707-201ENSMUST00000196325 491 ntBASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx4Q7TNK1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.21■□□□□ 0.02
Rfx4Q7TNK1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx4Q7TNK1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx4Q7TNK1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx4Q7TNK1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Gm11539-201ENSMUST00000119837 557 ntBASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Gm10698-201ENSMUST00000182663 604 ntBASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rfx4Q7TNK1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms