Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp3Q7TNH6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Gm15173-201ENSMUST00000122049 433 ntBASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp3Q7TNH6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp3Q7TNH6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Gm6550-201ENSMUST00000187574 993 ntBASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp3Q7TNH6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
Nphp3Q7TNH6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms