Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 App-207ENSMUST00000227737 2827 ntBASIC12.91□□□□□ -0.34
Vma21Q78T54 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm13559-201ENSMUST00000120476 863 ntBASIC12.91□□□□□ -0.34
Vma21Q78T54 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm27389-201ENSMUST00000183622 195 ntBASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm45058-201ENSMUST00000205810 766 ntBASIC12.91□□□□□ -0.34
Vma21Q78T54 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.91□□□□□ -0.34
Vma21Q78T54 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vma21Q78T54 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.91□□□□□ -0.34
Vma21Q78T54 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vma21Q78T54 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.9□□□□□ -0.34
Vma21Q78T54 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.9□□□□□ -0.34
Vma21Q78T54 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.9□□□□□ -0.34
Vma21Q78T54 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vma21Q78T54 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vma21Q78T54 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Vma21Q78T54 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vma21Q78T54 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Vma21Q78T54 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms