Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.39■□□□□ 0.21
Cspg5Q71M36 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.39■□□□□ 0.21
Cspg5Q71M36 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.39■□□□□ 0.21
Cspg5Q71M36 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg5Q71M36 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.38■□□□□ 0.21
Cspg5Q71M36 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg5Q71M36 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm23935-201ENSMUST00000102303 57 ntBASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm24270-201ENSMUST00000102326 57 ntBASIC16.37■□□□□ 0.21
Cspg5Q71M36 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm14494-201ENSMUST00000118786 435 ntBASIC16.37■□□□□ 0.21
Cspg5Q71M36 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm24245-201ENSMUST00000157318 57 ntBASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm7230-201ENSMUST00000173026 815 ntBASIC16.37■□□□□ 0.21
Cspg5Q71M36 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm27397-201ENSMUST00000184997 107 ntBASIC16.37■□□□□ 0.21
Cspg5Q71M36 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cspg5Q71M36 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cspg5Q71M36 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.36■□□□□ 0.21
Cspg5Q71M36 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Gm10576-201ENSMUST00000191927 825 ntBASIC16.36■□□□□ 0.21
Cspg5Q71M36 Gm6089-201ENSMUST00000197666 938 ntBASIC16.36■□□□□ 0.21
Cspg5Q71M36 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.36■□□□□ 0.21
Cspg5Q71M36 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.36■□□□□ 0.21
Cspg5Q71M36 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms