Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Gm13223-201ENSMUST00000118609 747 ntBASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup188Q6ZQH8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Grk6-207ENSMUST00000225925 2769 ntBASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Gm2423-201ENSMUST00000074863 733 ntBASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup188Q6ZQH8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup188Q6ZQH8 Gm15693-201ENSMUST00000120470 637 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm38294-201ENSMUST00000192831 381 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm6973-201ENSMUST00000117080 721 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup188Q6ZQH8 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms