Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Gm9385-201ENSMUST00000117563 472 ntBASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ddx55Q6ZPL9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Mir449b-201ENSMUST00000104833 80 ntBASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Gm12008-201ENSMUST00000117791 755 ntBASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx55Q6ZPL9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Rarb-207ENSMUST00000225921 2756 ntBASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Gm22175-201ENSMUST00000175007 78 ntBASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx55Q6ZPL9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Gm16198-201ENSMUST00000118766 670 ntBASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ddx55Q6ZPL9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ddx55Q6ZPL9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Ddx55Q6ZPL9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ddx55Q6ZPL9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx55Q6ZPL9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms