Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Gm8344-201ENSMUST00000119813 856 ntBASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Npc1l1Q6T3U4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npc1l1Q6T3U4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Gm14822-201ENSMUST00000122247 291 ntBASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Gm27646-201ENSMUST00000183989 110 ntBASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Npc1l1Q6T3U4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms