Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Gm45058-201ENSMUST00000205810 766 ntBASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcd3Q6P9Z1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Gm18959-201ENSMUST00000208954 655 ntBASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd3Q6P9Z1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd3Q6P9Z1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd3Q6P9Z1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms