Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rtl3Q6P1Y1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm27525-201ENSMUST00000184465 107 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44357-201ENSMUST00000195897 142 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm19658-201ENSMUST00000196231 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44367-201ENSMUST00000196836 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44350-201ENSMUST00000197197 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44390-201ENSMUST00000197533 144 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44313-201ENSMUST00000198018 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44486-201ENSMUST00000198508 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44314-201ENSMUST00000199263 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44394-201ENSMUST00000199558 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44484-201ENSMUST00000199873 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44466-201ENSMUST00000200264 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm44359-201ENSMUST00000200671 138 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtl3Q6P1Y1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtl3Q6P1Y1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Gm8097-201ENSMUST00000117903 829 ntBASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.3■□□□□ 0.2
Rtl3Q6P1Y1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtl3Q6P1Y1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.29■□□□□ 0.2
Rtl3Q6P1Y1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtl3Q6P1Y1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms