Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Mir8098-201ENSMUST00000184011 137 ntBASIC17.02■□□□□ 0.32
Retreg2Q6NS82 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg2Q6NS82 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg2Q6NS82 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg2Q6NS82 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.01■□□□□ 0.31
Retreg2Q6NS82 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.01■□□□□ 0.31
Retreg2Q6NS82 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.01■□□□□ 0.31
Retreg2Q6NS82 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retreg2Q6NS82 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17■□□□□ 0.31
Retreg2Q6NS82 AC153794.1-201ENSMUST00000169148 126 ntBASIC17■□□□□ 0.31
Retreg2Q6NS82 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Gm27867-201ENSMUST00000184778 125 ntBASIC17■□□□□ 0.31
Retreg2Q6NS82 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17■□□□□ 0.31
Retreg2Q6NS82 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retreg2Q6NS82 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Retreg2Q6NS82 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg2Q6NS82 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retreg2Q6NS82 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Gm12644-201ENSMUST00000119935 606 ntBASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Gm10052-201ENSMUST00000168019 960 ntBASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Gm7729-201ENSMUST00000050143 801 ntBASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg2Q6NS82 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.98■□□□□ 0.31
Retreg2Q6NS82 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms