Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzrn3Q69ZS0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Gm14822-201ENSMUST00000122247 291 ntBASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pdzrn3Q69ZS0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pdzrn3Q69ZS0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzrn3Q69ZS0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Pdzrn3Q69ZS0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzrn3Q69ZS0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms