Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.59■□□□□ 0.25
Scube3Q66PY1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Rps4l-201ENSMUST00000071745 943 ntBASIC16.59■□□□□ 0.25
Scube3Q66PY1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.59■□□□□ 0.25
Scube3Q66PY1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scube3Q66PY1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scube3Q66PY1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scube3Q66PY1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.58■□□□□ 0.24
Scube3Q66PY1 Gm43514-201ENSMUST00000198852 424 ntBASIC16.58■□□□□ 0.24
Scube3Q66PY1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.58■□□□□ 0.24
Scube3Q66PY1 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.58■□□□□ 0.24
Scube3Q66PY1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scube3Q66PY1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scube3Q66PY1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.57■□□□□ 0.24
Scube3Q66PY1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.57■□□□□ 0.24
Scube3Q66PY1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Gm19087-201ENSMUST00000191430 946 ntBASIC16.57■□□□□ 0.24
Scube3Q66PY1 CT009738.1-201ENSMUST00000219031 809 ntBASIC16.57■□□□□ 0.24
Scube3Q66PY1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scube3Q66PY1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gm13418-201ENSMUST00000119097 944 ntBASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gm4535-201ENSMUST00000182274 558 ntBASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.56■□□□□ 0.24
Scube3Q66PY1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.56■□□□□ 0.24
Scube3Q66PY1 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.56■□□□□ 0.24
Scube3Q66PY1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gm10355-201ENSMUST00000097146 517 ntBASIC16.56■□□□□ 0.24
Scube3Q66PY1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scube3Q66PY1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms