Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Scn9aQ62205 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.48■□□□□ 0.55
Scn9aQ62205 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn9aQ62205 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn9aQ62205 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scn9aQ62205 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn9aQ62205 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Scn9aQ62205 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn9aQ62205 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn9aQ62205 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn9aQ62205 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn9aQ62205 Grk6-207ENSMUST00000225925 2769 ntBASIC18.46■□□□□ 0.55
Scn9aQ62205 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scn9aQ62205 Haglr-201ENSMUST00000100000 2085 ntBASIC18.46■□□□□ 0.55
Scn9aQ62205 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.46■□□□□ 0.55
Scn9aQ62205 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.46■□□□□ 0.55
Scn9aQ62205 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn9aQ62205 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.46■□□□□ 0.55
Scn9aQ62205 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.54
Scn9aQ62205 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scn9aQ62205 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scn9aQ62205 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scn9aQ62205 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn9aQ62205 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn9aQ62205 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Scn9aQ62205 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn9aQ62205 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Scn9aQ62205 Gm7653-201ENSMUST00000214567 508 ntBASIC18.45■□□□□ 0.54
Scn9aQ62205 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn9aQ62205 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.45■□□□□ 0.54
Scn9aQ62205 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn9aQ62205 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn9aQ62205 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn9aQ62205 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn9aQ62205 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 Mir7684-201ENSMUST00000183858 60 ntBASIC18.44■□□□□ 0.54
Scn9aQ62205 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.44■□□□□ 0.54
Scn9aQ62205 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn9aQ62205 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn9aQ62205 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn9aQ62205 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.43■□□□□ 0.54
Scn9aQ62205 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.43■□□□□ 0.54
Scn9aQ62205 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.43■□□□□ 0.54
Scn9aQ62205 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Gm7730-201ENSMUST00000212486 454 ntBASIC18.43■□□□□ 0.54
Scn9aQ62205 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.43■□□□□ 0.54
Scn9aQ62205 Gm10154-201ENSMUST00000084445 354 ntBASIC18.43■□□□□ 0.54
Scn9aQ62205 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Scn9aQ62205 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms