Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Sox17Q61473 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox17Q61473 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox17Q61473 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox17Q61473 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox17Q61473 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox17Q61473 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox17Q61473 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox17Q61473 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sox17Q61473 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox17Q61473 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox17Q61473 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox17Q61473 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox17Q61473 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sox17Q61473 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sox17Q61473 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox17Q61473 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.87□□□□□ -0.03
Sox17Q61473 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sox17Q61473 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox17Q61473 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Sox17Q61473 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.87□□□□□ -0.03
Sox17Q61473 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Gm11539-201ENSMUST00000119837 557 ntBASIC14.87□□□□□ -0.03
Sox17Q61473 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.87□□□□□ -0.03
Sox17Q61473 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.87□□□□□ -0.03
Sox17Q61473 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox17Q61473 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.86□□□□□ -0.03
Sox17Q61473 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.86□□□□□ -0.03
Sox17Q61473 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Sox17Q61473 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.86□□□□□ -0.03
Sox17Q61473 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.86□□□□□ -0.03
Sox17Q61473 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox17Q61473 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.85□□□□□ -0.03
Sox17Q61473 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sox17Q61473 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.85□□□□□ -0.03
Sox17Q61473 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox17Q61473 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.85□□□□□ -0.03
Sox17Q61473 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox17Q61473 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.85□□□□□ -0.03
Sox17Q61473 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Sox17Q61473 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox17Q61473 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms