Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ift88Q61371 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.52■□□□□ 0.4
Ift88Q61371 Gm11355-201ENSMUST00000121120 306 ntBASIC17.52■□□□□ 0.4
Ift88Q61371 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.52■□□□□ 0.4
Ift88Q61371 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.52■□□□□ 0.4
Ift88Q61371 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ift88Q61371 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ift88Q61371 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ift88Q61371 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ift88Q61371 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ift88Q61371 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ift88Q61371 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Ift88Q61371 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ift88Q61371 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.52■□□□□ 0.39
Ift88Q61371 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ift88Q61371 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ift88Q61371 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Gm22697-201ENSMUST00000175194 63 ntBASIC17.51■□□□□ 0.39
Ift88Q61371 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.51■□□□□ 0.39
Ift88Q61371 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.51■□□□□ 0.39
Ift88Q61371 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Ift88Q61371 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.51■□□□□ 0.39
Ift88Q61371 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Ift88Q61371 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.51■□□□□ 0.39
Ift88Q61371 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.51■□□□□ 0.39
Ift88Q61371 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ift88Q61371 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.5■□□□□ 0.39
Ift88Q61371 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.5■□□□□ 0.39
Ift88Q61371 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.5■□□□□ 0.39
Ift88Q61371 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ift88Q61371 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.5■□□□□ 0.39
Ift88Q61371 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ift88Q61371 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ift88Q61371 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ift88Q61371 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ift88Q61371 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ift88Q61371 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
Ift88Q61371 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ift88Q61371 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Ift88Q61371 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.49■□□□□ 0.39
Ift88Q61371 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.49■□□□□ 0.39
Ift88Q61371 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ift88Q61371 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ift88Q61371 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Ift88Q61371 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms