Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptch1Q61115 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptch1Q61115 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptch1Q61115 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ptch1Q61115 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Ptch1Q61115 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC22.63■■□□□ 1.21
Ptch1Q61115 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC22.63■■□□□ 1.21
Ptch1Q61115 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
Ptch1Q61115 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ptch1Q61115 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC22.63■■□□□ 1.21
Ptch1Q61115 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC22.63■■□□□ 1.21
Ptch1Q61115 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Ptch1Q61115 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch1Q61115 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.63■■□□□ 1.21
Ptch1Q61115 AC124751.1-201ENSMUST00000222716 1408 ntBASIC22.62■■□□□ 1.21
Ptch1Q61115 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Ptch1Q61115 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptch1Q61115 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ptch1Q61115 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC22.62■■□□□ 1.21
Ptch1Q61115 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
Ptch1Q61115 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ptch1Q61115 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ptch1Q61115 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
Ptch1Q61115 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ptch1Q61115 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Ptch1Q61115 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC22.61■■□□□ 1.21
Ptch1Q61115 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC22.61■■□□□ 1.21
Ptch1Q61115 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Gm25144-201ENSMUST00000179561 110 ntBASIC22.61■■□□□ 1.21
Ptch1Q61115 Gm25352-201ENSMUST00000179815 110 ntBASIC22.61■■□□□ 1.21
Ptch1Q61115 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch1Q61115 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC22.6■■□□□ 1.21
Ptch1Q61115 Gm8410-201ENSMUST00000117225 605 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Ptch1Q61115 Gm27680-201ENSMUST00000184192 160 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Gm7775-201ENSMUST00000218871 853 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 AC124732.1-201ENSMUST00000221551 910 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
Ptch1Q61115 Syt7-204ENSMUST00000223586 1344 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC22.6■■□□□ 1.21
Ptch1Q61115 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
Ptch1Q61115 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch1Q61115 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC22.59■■□□□ 1.21
Ptch1Q61115 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC22.59■■□□□ 1.21
Ptch1Q61115 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Ptch1Q61115 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch1Q61115 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.58■■□□□ 1.21
Ptch1Q61115 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Ptch1Q61115 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Ptch1Q61115 Gm6912-201ENSMUST00000117218 544 ntBASIC22.58■■□□□ 1.21
Ptch1Q61115 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC22.58■■□□□ 1.21
Ptch1Q61115 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms