Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Gm13186-201ENSMUST00000118031 316 ntBASIC13.37□□□□□ -0.27
Scarb1Q61009 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.37□□□□□ -0.27
Scarb1Q61009 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.37□□□□□ -0.27
Scarb1Q61009 Timm23-208ENSMUST00000226683 750 ntBASIC13.37□□□□□ -0.27
Scarb1Q61009 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scarb1Q61009 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scarb1Q61009 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scarb1Q61009 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scarb1Q61009 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.34□□□□□ -0.27
Scarb1Q61009 Phf7-203ENSMUST00000226565 1971 ntBASIC13.34□□□□□ -0.27
Scarb1Q61009 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Mir1199-201ENSMUST00000117015 119 ntBASIC13.34□□□□□ -0.27
Scarb1Q61009 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.34□□□□□ -0.27
Scarb1Q61009 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.34□□□□□ -0.27
Scarb1Q61009 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms