Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.5■□□□□ 0.07
Col12a1Q60847 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Syt7-204ENSMUST00000223586 1344 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.5■□□□□ 0.07
Col12a1Q60847 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col12a1Q60847 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col12a1Q60847 Gm12008-201ENSMUST00000117791 755 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.5■□□□□ 0.07
Col12a1Q60847 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Gm25144-201ENSMUST00000179561 110 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Gm25352-201ENSMUST00000179815 110 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 AY702102-202ENSMUST00000194651 1173 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Gm45384-201ENSMUST00000210451 277 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Gm10154-201ENSMUST00000084445 354 ntBASIC15.5■□□□□ 0.07
Col12a1Q60847 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col12a1Q60847 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm11425-201ENSMUST00000119608 498 ntBASIC15.49■□□□□ 0.07
Col12a1Q60847 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm28631-201ENSMUST00000190740 334 ntBASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.49■□□□□ 0.07
Col12a1Q60847 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm9396-201ENSMUST00000076703 567 ntBASIC15.49■□□□□ 0.07
Col12a1Q60847 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col12a1Q60847 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col12a1Q60847 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col12a1Q60847 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm6218-201ENSMUST00000219812 628 ntBASIC15.49■□□□□ 0.07
Col12a1Q60847 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.49■□□□□ 0.07
Col12a1Q60847 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col12a1Q60847 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm28630-201ENSMUST00000187806 498 ntBASIC15.48■□□□□ 0.07
Col12a1Q60847 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.48■□□□□ 0.07
Col12a1Q60847 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.48■□□□□ 0.07
Col12a1Q60847 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.48■□□□□ 0.07
Col12a1Q60847 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col12a1Q60847 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm17150-201ENSMUST00000165577 381 ntBASIC15.48■□□□□ 0.07
Col12a1Q60847 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms