Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.1■□□□□ 0.33
Atp13a4Q5XF90 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Atp13a4Q5XF90 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp13a4Q5XF90 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Atp13a4Q5XF90 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp13a4Q5XF90 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp13a4Q5XF90 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm12644-201ENSMUST00000119935 606 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm8825-201ENSMUST00000182565 998 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm4518-201ENSMUST00000182638 718 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm9172-201ENSMUST00000212092 954 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp13a4Q5XF90 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp13a4Q5XF90 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms