Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.81■□□□□ 0.28
Shroom1Q5SX79 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.8■□□□□ 0.28
Shroom1Q5SX79 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom1Q5SX79 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm15590-201ENSMUST00000078419 552 ntBASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom1Q5SX79 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Gm15467-201ENSMUST00000120582 445 ntBASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom1Q5SX79 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Gm13036-201ENSMUST00000117799 748 ntBASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Gm14140-201ENSMUST00000119999 995 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms