Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.72■□□□□ 0.27
Ctc1Q5SUQ9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ctc1Q5SUQ9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ctc1Q5SUQ9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Gm27525-201ENSMUST00000184465 107 ntBASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ctc1Q5SUQ9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.69■□□□□ 0.26
Ctc1Q5SUQ9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Mir6404-201ENSMUST00000183699 94 ntBASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Gm6376-201ENSMUST00000209407 580 ntBASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ctc1Q5SUQ9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.67■□□□□ 0.26
Ctc1Q5SUQ9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ctc1Q5SUQ9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ctc1Q5SUQ9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms