Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm13836-201ENSMUST00000121159 501 ntBASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav7-2Q5R1I3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-2Q5R1I3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Gm9013-201ENSMUST00000132939 882 ntBASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Gm37722-201ENSMUST00000193757 208 ntBASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-2Q5R1I3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms