Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Sybu-209ENSMUST00000228639 4113 ntBASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5d-4Q5R1F6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5d-4Q5R1F6 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Gm15794-201ENSMUST00000120182 631 ntBASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms