Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm9987-201ENSMUST00000069768 567 ntBASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav6-3Q5R1E6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Gm9013-201ENSMUST00000132939 882 ntBASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav6-3Q5R1E6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Gm10013-201ENSMUST00000106074 672 ntBASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-3Q5R1E6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-3Q5R1E6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms