Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Syt7-204ENSMUST00000223586 1344 ntBASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col27a1Q5QNQ9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col27a1Q5QNQ9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Gm44719-201ENSMUST00000206404 149 ntBASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col27a1Q5QNQ9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Gm15321-201ENSMUST00000121290 288 ntBASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Gm38225-201ENSMUST00000194001 393 ntBASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Gm18049-201ENSMUST00000208909 581 ntBASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.1■□□□□ 0.01
Col27a1Q5QNQ9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Gm14722-201ENSMUST00000118943 689 ntBASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Gm29667-201ENSMUST00000190817 490 ntBASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col27a1Q5QNQ9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col27a1Q5QNQ9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.08■□□□□ 0.01
Col27a1Q5QNQ9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col27a1Q5QNQ9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col27a1Q5QNQ9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col27a1Q5QNQ9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms