Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Gm9727-201ENSMUST00000161387 555 ntBASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Gm37153-201ENSMUST00000193637 231 ntBASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38aQ4FK66 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Gm12260-201ENSMUST00000122447 411 ntBASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Gm37935-201ENSMUST00000192012 982 ntBASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38aQ4FK66 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Gm5867-201ENSMUST00000063197 592 ntBASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38aQ4FK66 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf38aQ4FK66 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf38aQ4FK66 Grk6-207ENSMUST00000225925 2769 ntBASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Gm45167-201ENSMUST00000208007 322 ntBASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prpf38aQ4FK66 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms