Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gm2213-201ENSMUST00000197485 688 ntBASIC15.03■□□□□ -0
Lin28bQ45KJ6 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.03■□□□□ -0
Lin28bQ45KJ6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lin28bQ45KJ6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Gm4995-201ENSMUST00000117247 432 ntBASIC15.02■□□□□ -0
Lin28bQ45KJ6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Gm14494-201ENSMUST00000118786 435 ntBASIC15.02■□□□□ -0
Lin28bQ45KJ6 Gm25925-201ENSMUST00000158314 306 ntBASIC15.02■□□□□ -0
Lin28bQ45KJ6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.02■□□□□ -0
Lin28bQ45KJ6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lin28bQ45KJ6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lin28bQ45KJ6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lin28bQ45KJ6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lin28bQ45KJ6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lin28bQ45KJ6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lin28bQ45KJ6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms