Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp48Q3V0C5 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Gm14701-201ENSMUST00000117156 348 ntBASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.55■□□□□ 0.72
Usp48Q3V0C5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Usp48Q3V0C5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Gm12497-201ENSMUST00000138778 237 ntBASIC19.54■□□□□ 0.72
Usp48Q3V0C5 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp48Q3V0C5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Gm8655-201ENSMUST00000221159 852 ntBASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp48Q3V0C5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Gm44872-201ENSMUST00000207864 420 ntBASIC19.52■□□□□ 0.72
Usp48Q3V0C5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp48Q3V0C5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp48Q3V0C5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp48Q3V0C5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms