Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 AV026068-213ENSMUST00000223675 1171 ntBASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Naf1Q3UMQ8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Gm5364-201ENSMUST00000216789 889 ntBASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Naf1Q3UMQ8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm13036-201ENSMUST00000117799 748 ntBASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.04■□□□□ 0.16
Naf1Q3UMQ8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms