Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Mir8098-201ENSMUST00000184011 137 ntBASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Uspl1Q3ULM6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Grk6-207ENSMUST00000225925 2769 ntBASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uspl1Q3ULM6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uspl1Q3ULM6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Gm14722-201ENSMUST00000118943 689 ntBASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Gm28659-201ENSMUST00000188013 759 ntBASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.34■□□□□ 0.85
Uspl1Q3ULM6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm5682-201ENSMUST00000173402 505 ntBASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uspl1Q3ULM6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Uspl1Q3ULM6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uspl1Q3ULM6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms