Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf149Q3U2C5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf149Q3U2C5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Gm18101-201ENSMUST00000215769 548 ntBASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf149Q3U2C5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms