Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lins1Q3U1D0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.78■□□□□ 0.6
Lins1Q3U1D0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lins1Q3U1D0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Gm27702-201ENSMUST00000184512 56 ntBASIC18.77■□□□□ 0.6
Lins1Q3U1D0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lins1Q3U1D0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lins1Q3U1D0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Lins1Q3U1D0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Lins1Q3U1D0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lins1Q3U1D0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lins1Q3U1D0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Gm4995-201ENSMUST00000117247 432 ntBASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Gm11764-201ENSMUST00000120221 623 ntBASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Gm6736-201ENSMUST00000166583 948 ntBASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Gm5682-201ENSMUST00000173402 505 ntBASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms