Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.12□□□□□ -0.31
Trim63Q38HM4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim63Q38HM4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Trim63Q38HM4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.11□□□□□ -0.31
Trim63Q38HM4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.11□□□□□ -0.31
Trim63Q38HM4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.11□□□□□ -0.31
Trim63Q38HM4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.11□□□□□ -0.31
Trim63Q38HM4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim63Q38HM4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Gm38205-201ENSMUST00000192243 258 ntBASIC13.1□□□□□ -0.31
Trim63Q38HM4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim63Q38HM4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.09□□□□□ -0.31
Trim63Q38HM4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms