Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col19a1Q0VF58 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Gm6973-201ENSMUST00000117080 721 ntBASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Gm10154-201ENSMUST00000084445 354 ntBASIC16.78■□□□□ 0.28
Col19a1Q0VF58 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col19a1Q0VF58 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col19a1Q0VF58 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col19a1Q0VF58 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col19a1Q0VF58 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col19a1Q0VF58 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col19a1Q0VF58 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col19a1Q0VF58 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col19a1Q0VF58 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col19a1Q0VF58 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Gm6912-201ENSMUST00000117218 544 ntBASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Gm14719-201ENSMUST00000121891 340 ntBASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col19a1Q0VF58 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col19a1Q0VF58 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col19a1Q0VF58 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms