Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Gm7213-201ENSMUST00000215977 950 ntBASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Gm10566-201ENSMUST00000086739 996 ntBASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptchd3Q0EEE2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Gm45058-201ENSMUST00000205810 766 ntBASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Phf7-203ENSMUST00000226565 1971 ntBASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ptchd3Q0EEE2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Gm6433-201ENSMUST00000118634 875 ntBASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms