Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1sQ02789 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.85■□□□□ 0.77
Cacna1sQ02789 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1sQ02789 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.85■□□□□ 0.77
Cacna1sQ02789 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.85■□□□□ 0.77
Cacna1sQ02789 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1sQ02789 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1sQ02789 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cacna1sQ02789 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1sQ02789 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Haglr-201ENSMUST00000100000 2085 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm15321-201ENSMUST00000121290 288 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm14928-201ENSMUST00000120198 477 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm8515-201ENSMUST00000194852 576 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm6007-201ENSMUST00000208170 823 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm18049-201ENSMUST00000208909 581 ntBASIC19.84■□□□□ 0.77
Cacna1sQ02789 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.84■□□□□ 0.77
Cacna1sQ02789 Asic1-205ENSMUST00000228185 1818 ntBASIC19.83■□□□□ 0.77
Cacna1sQ02789 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1sQ02789 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1sQ02789 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1sQ02789 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1sQ02789 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1sQ02789 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1sQ02789 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1sQ02789 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Gm14722-201ENSMUST00000118943 689 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Gm44719-201ENSMUST00000206404 149 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 Gm6218-201ENSMUST00000219812 628 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Gm38225-201ENSMUST00000194001 393 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.82■□□□□ 0.76
Cacna1sQ02789 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1sQ02789 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.81■□□□□ 0.76
Cacna1sQ02789 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
Cacna1sQ02789 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1sQ02789 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Mir7085-201ENSMUST00000184353 66 ntBASIC19.8■□□□□ 0.76
Cacna1sQ02789 Gm27838-201ENSMUST00000184829 128 ntBASIC19.8■□□□□ 0.76
Cacna1sQ02789 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.8■□□□□ 0.76
Cacna1sQ02789 Gm9899-201ENSMUST00000065519 555 ntBASIC19.8■□□□□ 0.76
Cacna1sQ02789 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1sQ02789 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms