Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.18■□□□□ 0.66
Snai1Q02085 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snai1Q02085 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Snai1Q02085 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snai1Q02085 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Snai1Q02085 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.17■□□□□ 0.66
Snai1Q02085 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Mir449b-201ENSMUST00000104833 80 ntBASIC19.17■□□□□ 0.66
Snai1Q02085 Mir7023-201ENSMUST00000185093 64 ntBASIC19.17■□□□□ 0.66
Snai1Q02085 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Snai1Q02085 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.17■□□□□ 0.66
Snai1Q02085 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snai1Q02085 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Snai1Q02085 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.16■□□□□ 0.66
Snai1Q02085 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Snai1Q02085 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.16■□□□□ 0.66
Snai1Q02085 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Snai1Q02085 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.16■□□□□ 0.66
Snai1Q02085 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.16■□□□□ 0.66
Snai1Q02085 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.16■□□□□ 0.66
Snai1Q02085 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.16■□□□□ 0.66
Snai1Q02085 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Snai1Q02085 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.16■□□□□ 0.66
Snai1Q02085 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.16■□□□□ 0.66
Snai1Q02085 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.16■□□□□ 0.66
Snai1Q02085 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snai1Q02085 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.15■□□□□ 0.66
Snai1Q02085 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Gm2272-201ENSMUST00000194903 582 ntBASIC19.15■□□□□ 0.66
Snai1Q02085 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.15■□□□□ 0.66
Snai1Q02085 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snai1Q02085 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.15■□□□□ 0.66
Snai1Q02085 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.15■□□□□ 0.66
Snai1Q02085 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snai1Q02085 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snai1Q02085 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snai1Q02085 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Snai1Q02085 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Snai1Q02085 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Snai1Q02085 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snai1Q02085 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Snai1Q02085 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Snai1Q02085 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Snai1Q02085 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.14■□□□□ 0.65
Snai1Q02085 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Snai1Q02085 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snai1Q02085 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Snai1Q02085 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snai1Q02085 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Snai1Q02085 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Snai1Q02085 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snai1Q02085 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
Snai1Q02085 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.13■□□□□ 0.65
Snai1Q02085 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snai1Q02085 Gm22065-201ENSMUST00000103753 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm22066-201ENSMUST00000103761 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm24932-201ENSMUST00000103763 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm24115-201ENSMUST00000103799 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm22190-201ENSMUST00000103827 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm22191-201ENSMUST00000103831 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm24721-201ENSMUST00000103849 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm28018-201ENSMUST00000103869 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Gm26399-201ENSMUST00000103937 110 ntBASIC19.13■□□□□ 0.65
Snai1Q02085 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snai1Q02085 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.13■□□□□ 0.65
Snai1Q02085 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms