Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col1a2Q01149 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col1a2Q01149 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.72■□□□□ 0.75
Col1a2Q01149 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.72■□□□□ 0.75
Col1a2Q01149 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.72■□□□□ 0.75
Col1a2Q01149 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.72■□□□□ 0.75
Col1a2Q01149 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.72■□□□□ 0.75
Col1a2Q01149 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col1a2Q01149 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.72■□□□□ 0.75
Col1a2Q01149 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col1a2Q01149 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.71■□□□□ 0.75
Col1a2Q01149 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col1a2Q01149 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col1a2Q01149 Gm14722-201ENSMUST00000118943 689 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Gm8318-201ENSMUST00000182954 872 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Gm5177-201ENSMUST00000183092 997 ntBASIC19.7■□□□□ 0.74
Col1a2Q01149 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col1a2Q01149 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col1a2Q01149 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.69■□□□□ 0.74
Col1a2Q01149 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.69■□□□□ 0.74
Col1a2Q01149 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.69■□□□□ 0.74
Col1a2Q01149 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms