Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.93■□□□□ 0.46
GabpaQ00422 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GabpaQ00422 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GabpaQ00422 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GabpaQ00422 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
GabpaQ00422 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GabpaQ00422 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Gm2756-201ENSMUST00000195851 400 ntBASIC17.92■□□□□ 0.46
GabpaQ00422 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.92■□□□□ 0.46
GabpaQ00422 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GabpaQ00422 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
GabpaQ00422 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GabpaQ00422 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.91■□□□□ 0.46
GabpaQ00422 Mir8117-201ENSMUST00000184773 107 ntBASIC17.91■□□□□ 0.46
GabpaQ00422 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.91■□□□□ 0.46
GabpaQ00422 Gm43575-201ENSMUST00000196420 516 ntBASIC17.91■□□□□ 0.46
GabpaQ00422 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.91■□□□□ 0.46
GabpaQ00422 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.91■□□□□ 0.46
GabpaQ00422 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GabpaQ00422 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GabpaQ00422 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GabpaQ00422 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
GabpaQ00422 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.9■□□□□ 0.46
GabpaQ00422 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.9■□□□□ 0.46
GabpaQ00422 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GabpaQ00422 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GabpaQ00422 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GabpaQ00422 Haglr-201ENSMUST00000100000 2085 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.89■□□□□ 0.45
GabpaQ00422 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GabpaQ00422 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GabpaQ00422 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GabpaQ00422 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GabpaQ00422 Gm23935-201ENSMUST00000102303 57 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Gm24270-201ENSMUST00000102326 57 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.89■□□□□ 0.45
GabpaQ00422 Gm24245-201ENSMUST00000157318 57 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
GabpaQ00422 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
GabpaQ00422 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.89■□□□□ 0.45
GabpaQ00422 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
GabpaQ00422 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GabpaQ00422 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms