Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Gm8344-201ENSMUST00000119813 856 ntBASIC15.15■□□□□ 0.02
Brca2P97929 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.15■□□□□ 0.02
Brca2P97929 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca2P97929 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca2P97929 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Brca2P97929 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Brca2P97929 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca2P97929 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.15■□□□□ 0.02
Brca2P97929 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca2P97929 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.15■□□□□ 0.02
Brca2P97929 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.15■□□□□ 0.02
Brca2P97929 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Brca2P97929 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Gm38294-201ENSMUST00000192831 381 ntBASIC15.14■□□□□ 0.01
Brca2P97929 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Brca2P97929 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.14■□□□□ 0.01
Brca2P97929 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Gm14719-201ENSMUST00000121891 340 ntBASIC15.14■□□□□ 0.01
Brca2P97929 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Brca2P97929 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Brca2P97929 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.13■□□□□ 0.01
Brca2P97929 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.13■□□□□ 0.01
Brca2P97929 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.13■□□□□ 0.01
Brca2P97929 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Brca2P97929 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Brca2P97929 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.13■□□□□ 0.01
Brca2P97929 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.13■□□□□ 0.01
Brca2P97929 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca2P97929 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Brca2P97929 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Gm15358-201ENSMUST00000119249 520 ntBASIC15.12■□□□□ 0.01
Brca2P97929 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.12■□□□□ 0.01
Brca2P97929 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Brca2P97929 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.12■□□□□ 0.01
Brca2P97929 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.12■□□□□ 0.01
Brca2P97929 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.12■□□□□ 0.01
Brca2P97929 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.12■□□□□ 0.01
Brca2P97929 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.12■□□□□ 0.01
Brca2P97929 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.12■□□□□ 0.01
Brca2P97929 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca2P97929 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Brca2P97929 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.11■□□□□ 0.01
Brca2P97929 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca2P97929 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca2P97929 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.11■□□□□ 0.01
Brca2P97929 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.11■□□□□ 0.01
Brca2P97929 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Brca2P97929 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.11■□□□□ 0.01
Brca2P97929 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca2P97929 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca2P97929 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms