Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Gm15427-201ENSMUST00000117288 531 ntBASIC14.55□□□□□ -0.08
Cacna1aP97445 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.55□□□□□ -0.08
Cacna1aP97445 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1aP97445 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.55□□□□□ -0.08
Cacna1aP97445 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.55□□□□□ -0.08
Cacna1aP97445 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.55□□□□□ -0.08
Cacna1aP97445 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.55□□□□□ -0.08
Cacna1aP97445 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1aP97445 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1aP97445 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Cacna1aP97445 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.54□□□□□ -0.08
Cacna1aP97445 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.54□□□□□ -0.08
Cacna1aP97445 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.54□□□□□ -0.08
Cacna1aP97445 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cacna1aP97445 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cacna1aP97445 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cacna1aP97445 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1aP97445 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm15358-201ENSMUST00000119249 520 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm11745-201ENSMUST00000121669 448 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cacna1aP97445 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacna1aP97445 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacna1aP97445 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm4518-201ENSMUST00000182638 718 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms